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GeoMx® DSP: Data Analysis for NGS Readout

GeoMx® DSP: Data Analysis for NGS Readout

This course covers GeoMx® DSP data analysis for RNA-NGS readout.

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Course Objectives

Review the steps of the data analysis workflow, for data from NGS-readout GeoMx experiments:

Module 1: Uploading counts, Creating a study, and Managing annotations

Module 2: Data QC

Module 3: Filtering and Data Normalization - RNA Assays

Module 4: Exploring Data and Performing Statistical Analysis

NOTE: This course takes approximately 60 minutes to complete as it is a deep dive into GeoMx® DSP data analysis.

  • Please take your time going through the videos and interactive exercises.
  • The course is broken up into 4 modules with some modules being larger than others.
  • Feel free to take a break between modules and come back to the course when you are ready to continue.

Curriculum60 min

  • Module 1
  • Module 1: Uploading Counts, Creating a Study, and Managing Annotations 15 min
  • Module 2
  • Module 2: Data QC 15 min
  • Module 3
  • Module 3: Filtering and Normalization - RNA Assays 10 min
  • Module 4
  • Module 4: Exploring Data and Performing Statistical Analysis 20 min

Course Objectives

Review the steps of the data analysis workflow, for data from NGS-readout GeoMx experiments:

Module 1: Uploading counts, Creating a study, and Managing annotations

Module 2: Data QC

Module 3: Filtering and Data Normalization - RNA Assays

Module 4: Exploring Data and Performing Statistical Analysis

NOTE: This course takes approximately 60 minutes to complete as it is a deep dive into GeoMx® DSP data analysis.

  • Please take your time going through the videos and interactive exercises.
  • The course is broken up into 4 modules with some modules being larger than others.
  • Feel free to take a break between modules and come back to the course when you are ready to continue.

Curriculum60 min

  • Module 1
  • Module 1: Uploading Counts, Creating a Study, and Managing Annotations 15 min
  • Module 2
  • Module 2: Data QC 15 min
  • Module 3
  • Module 3: Filtering and Normalization - RNA Assays 10 min
  • Module 4
  • Module 4: Exploring Data and Performing Statistical Analysis 20 min